Structurity: Evolutional and Developmental Genetics of Biosystem Patterns


I. Signal Transduction & Morphogenesis

1. Alan J. Whitmarsh, Roger J. Davis, A central control for cell growth, Nature Vol.403, 20 Jan.:255-256, 2000.
2. Antony M. Carr, Piecing together the p53 puzzle, Science Vol.287, 10 March, 2000.
3. Ann Grapin-Botton, Douglas A. Melton, Endoderm development, from patterning to organogesis, TIG, March, 2000, volume 16, No.3:124-130.
4. Blume-Jensen P, Hunter T. Oncogenic kinase signalling. Nature. 2001 May 17;411(6835):355-65. Review.
5. Brivanlou AH, Darnell JE Jr. Signal transduction and the control of gene expression. Science. 2002 Feb 1;295(5556):813-8. Review.
Cann RL. Genetic clues to dispersal in human populations: retracing the past from the present. Science. 2001 Mar 2;291(5509):1742-8. Review.
6. Carl J. Neumann and Christiane Nuesslein-Volhard, Patterning of the zebrafish retina by a wave of sonic hedgehog activity, Science Vol 289:2137-2139, 22 Sept. 2000.
7. Christopher T. Rankin, Tracie Bunton, Ann M. Lawler & Se-Jin Lee, Regulation of left-right patterning in mice by growth/differentiation factor-1, Nature Genetics Vol.24, March 2000.
8. Colin L. Stewart, Oct-4, scene 1: the drama of mouse development, Nature Genetics, Vol.24:328-330, 24 April, 2000.
9. Deborah J. Burks, Jaime Font de Mora, Markus Schubert, Dominic J. Withers, Martin G. Myers, Heather H. Towery, Shari L. Altamuro, Carrie L. Flint & Morris F. White, IRS-2 pathways integrate female reproduction and energy homeostasis, Nature Vol. 407:377-382, 21 Sept. 2000.
10. Eric S. Lander and Robert A. Weinberg, Genomics: journey to the center of biology, Science Vol. 287, 10 March 2000.
11. Gregory S. Barsh, I. Sadaf Farooqi & Stephen O`Rahilly, Genetics of body-weight regulation, Nature Vol.404:644-651, 6 April, 2000.
12. Francoise Pages, Stephen Kerridge, Morphogen gradients, a question of time or concentration? TIG Jan. 2000, vol.16, No.1:40-44.
13. James L. McGaugh, Memory-a century of consolidation, Science Vol.287:248-251, Jan.2000.
14. Jens C. Brüning, Dinesh Gautam, Deborah J. Burks, Jennifer Gillette, Markus Schubert, Paul C. Orban, Rüdiger Klein, Wilhelm Krone, Dirk Müller-Wieland, C. Ronald Kahn, Role of brain insulin receptor in control of body weight and reproduction, 22 Sept. 2000, Vol 289:2122-2125.
15. John T. Williams, The painless synergism of aspirin and opium, Nature Vol.390, 11 Dec. 1997.
16. Julia A. Romashkova & Sergei S. Makarov, NF-kB is a target of AKT in anti-apoptotic PDGF signalling, Nature Vol.401:86-90, 2 Sept.1999.
17. Katharine E. Winkler, Katherine I. Swenson, Sally Kornbluth, Anthony R. Means, Requirement of the Prolyl isomerase Pin1 for the replication checkpoint, 3 March 2000, Vol. 287:1644-1647, Science.
18. Leonard P. Freedman, Multimeric coactivator complexes for steroid/nuclear receptors, TEM Vol.10:403-407, No.10,1999.
19. Lodewijk V. Dekker and Anthony W. Segal, Signals to move cells, 11 Feb.2000, Vol.287:982-985.
20. Mark Peifer, Paul Polakis, Wnt signaling in oncogenesis and embryogenesis-a look outside the nucleus, Science Vol.287:1606-1609, 3 March 2000.
21. Michael W.Schwartz, Stephen C. Woods, Daniel Porte Jr, Seeley & Denis G. Baskin, Central nervous system control of food intake, Nature Vol. 404:661-671, 6 Appril 2000.
22. Patricia L. Lakin-Thomas, Circadian Rhythms, new fuctions for old clock genes? TIG March 2000, vol.16, no.3:135-142.
23. Roger D. Kornberg, Eukaryotic transcriptional control, TIG, Vol.15,No.12:M46-48, 1999.
24. Terry L. Page, Time is the essence: molecular analysis of the biological clock, Science Vol.263:1570-1572, 18 March, 1994.
25. Trisha Gura, A silence that speaks volumes, Nature Vol.404:804-808, 20 April 2000.
26. van Praag H, Schinder AF, Christie BR, Toni N, Palmer TD, Gage FH.Functional neurogenesis in the adult hippocampus. Nature. 2002 Feb 28;415(6875):1030-4.
27. Vicki Brower, New paths to pain relief, Nature Biotechnology, Vol. 18 April 2000.
28. Wickens M, Bernstein DS, Kimble J, Parker R.A PUF family portrait: 3'UTR regulation as a way of life. Trends Genet. 2002 Mar;18(3):150-7.

II. Cloning, Stem Cell & Differentiation

2. Benjamin E. Reubinoff, Martin F. Pera, Chui-Yee Fong, Alan Trounson, and Ariff Bongso, Embryonic stem cell lines from human blastocysts: somatic differentiation in vitro, Nature Biotechnology Vol.18, April 2000.
3. Claire M. McCallum, Luca Comai, Elizabeth A. Greene, and Steven Henikoff, Targeted screening for induced mutations, Nature Biotechnology, Vol. 18, April 2000.
4. Derek van der kooy, Samuel Weiss, Why stem cells?, Science, Vol.287, 25 Feb., 2000.
5. Fiona M. Watt, Brigid L.M. Hogan, Out of eden: stem cells and their niches, Science, vol.287:1427-1430,25 Feb.,2000.
6. A. Fraichard, O. Chassande, G. Bilbaut, C. Dehay, P.Savatier and J. Samarut, In vitro differentiation of embryonic stem cells into glial cells and functional neurons, J Cell Sci 1995 Oct;108 ( Pt 10):3181-8.
7. Fred H. Gage, Mammalian Neural Stem Cells, Science Vol.287:1433-1438, 25 feb.,2000.
8. Hitoshi Niwa, Jun-ichi Miyazaki & Austin G. Smith, Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells, Nature Genetics, Vol.24, April 2000.
9. Ian Wilmut, Keith Campbell & Colin Tudge, The second creation: the age of biological control by the scientists who cloned Dolly, Headline Book Publishing, 2000.
10. Irving L. Weissman, Translating stem and progenitor cell biology to the clinic: barriers and opportunities, Science Vol. 287:1442-1446, 2000.
11. Kathryn V. Anderson, Finding the genes that direct mammalian development, ENU mutagenesis in the mouse, TIG March 2000, vol.16,No.3:99_102.
12. Masahiro Sato, Yukiko Yasuoka, Hisako Kodama, Toshiteru Watanabe, Jun-Ichi Miyazaki, and Minoru Kimura, New approach to cell lineage analysis in mammals using the Cre-loxP system, Molecular reproduction and development 56:34-44, 2000.
13. Teruhiko Wakayama, Hiroyuki Tateno, et al, Nuclear transfer into mouse zygotes, Nature Genetics, vol.24:108-109, Feb., 2000.
14. Toru Kondo and Martin Raff, Oligodendrocyte procursor cells reprogrammed to become multipotential CNS stem cells, 8 Sept. 2000, Science Vol. 289.
15. Sally A. Moody, Cell lineage and fate determination, Academic Press, 1999.
16. Thierry Gallopin, Patrice Fort, Emmanuel Eggermann, Bruno Cauli, Pierre-Herve Luppi, Jean Rossier, Etienne Audinat, Michel Muhlethaler $ Mauro Serafin, Identification of sleep-promoting neurons in vitro, Nature Vol. 404, 27 April 2000.
17. William M. Rideout III, Teruhiko Wakayama, Anton Wutz, Kevin Eggan, Laurie Jackson-Grusby, Jessica Dausman, Ryuzo Yanagimachi & Rudolf Jaenisch, Genration of mice from wild-type and targeted ES cells by nuclear cloning, Nature Genetics, Vol. 24, Feb. 2000.

III. Transgenics & Gene expression

1. Ahmad R.H. Utomo, Alexander Yu. Nikitin, and Wen-Hwa Lee, Temporal, spatial, and cell type-specific control of Cre-mediated DNA recombination in transgenic mice, Nature Biotech. Vol. 17, Nov. 1999.
2. Alan M. Weiner, Do all SINEs lead to LINEs? Nature Genetics, Vol. 24, April, 2000.
3. Alia Qureshi Emili, and Gerard Cagney, Large-scale functional analysis using peptide or protein arrays, Nature Biotechnology, Vol.18, April 2000.
4. Anthony G. Comuzzie, David B. Allison, The search for human obesity genes, Science, Vol.280:1374-1377, 29 May, 1998.
5. Andrew Mountain, Gene therapy: the first decade, TIBTECH, March 2000, vol.18: 119-128.
6. Christopher J. Roberts, Bryce Nelson, Matthew J. Marton et al, Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles, Science vol.287:873-880, 4 Feb., 2000.
7. Ena Wang, Lance D. Miller, Galen A. Ohnmacht, Edison T. Liu, & Francesco M. Marincola, High-fidelity mRNA amplification for gene profiling, Nature Biotechnology, Vol.18, April 2000.
8. David Schlessinger, Yeast artificial chromosomes: tools for mapping and analysis of complex genomes, TIG Vol.6 No.8, Aug. 1990.
9. Feng Guo, Deshmukh N. Gopaul & Gregory D. Van Duyne, Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse, Nature Vol. 389:40-46, 4 Sept. 1997.
10. Gary Taubes, Biologists and engineers create a new generation of robots that imitate life, Science, 7 April:80-83, 2000.
11. Gavin D. Meredith, Christopher E. Sima, Joseph S. Soughayer, & Nancy L. Allbritton, Measurement of kinase activation in single mammalian cells, Nature Biotechnology, Vol. 18:309-312, March 2000.
12. Glenn C. Turner and Alexander Varshavsky, Dectecting and measuring cotranslational protein degradation in vivo, Science Vol 289:2117-2120.
13. Gunter Blobel, Richard W. Wozniak, Proteomics for the pore, Nature,vol.403:835-836, 24 Feb.2000.
14. Hurwitz DR, Nathan M, Barash I, Ilan N, Shani M. Specific combinations of human serum albumin introns direct high level expression of albumin in transfected COS cells and in the milk of transgenic mice. Transgenic Res. 1994 Nov;3(6):365-75.
15. Joseph Schlessinger, Novel fluorescent approaches for studying cell signaling in single cells, Nature Biotechnology, Vol.18:262-263, March 2000.
16. John R. Yates, III, Mass spectrometry, from genomics to proteomics, TIG, Jan. 2000, vol.16, no.1:5-8.
17. Kevin A. Ward, Transgene-mediated modifications to animal biochemistry, TIBTECH, March 2000, vol.17:99-102.
18. Michael V. Wiles, Franz Vauti, Jurgen Otte, et al, Establishment of a gene-trap sequence tag library to generate mutant mice from embryonic stem cells, Nature Genetics, vol.24:13-14, Jan.2000.
19. Octavian Henegariu, Patricia Bray-Ward & David C. Ward, Custom fluorescent-nucleotide synthesis as an alternative method for nucleic acid labeling, Nature Biotechnology, Vol.18:345-348, March 2000.
20. Qinghua Liu, Liman Wang, Anthony G.Frutos, Annie E. Condon, Robert M. Corn & Lloyd M. Smith, DNA computing on surfaces, Nature vol.403:175-179,13 Jan. 2000.
21. Vincent W. Coljee, Heather L. Murray, William F. Donahue, and Kevin A. Jarrell, Siamless gene engineering using RNA-and DNA-overhang cloning, Nature Biotech. Vol. 18, July 2000.

Structurity Bulletin